Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015876273.1_cds_XP_016436048.1_31948
CDS Infomation

[gene=LOC107762220] [db_xref=GeneID:107762220] [protein=fasciclin-like arabinogalactan protein 17 isoform X2] [protein_id=XP_016436048.1] [location=complement(join(20169..20230,22158..22701,22735..23493))] [gbkey=CDS]
Sequence

ATGGATTTTCAGATCTATGGCGTTAGCAATCTCTTCATTTTCACTGTTATACTCCTTTTC
TCCATTGCAGCTGCTACATTGCAAGAAAACCAAAATGCAACATTTGTAAAACCCACAACT
TCAGCACCCCAAATCAACTCAAACTCCATTCTTGTAGCTCTTTTGGATTCTCACTACACT
GAGCTATCTGAGCTAGTTGAAAAAGCCCTTTTGCTTCAAACACTTGAAGAAGCTGTTTCT
AAGCATAACATTACCATTTTTGCCCCTAAAAATGAGGCTCTTGAACGTGATTTGGACCCT
GAGTTCAAGCGTTTCTTGCTTGAACCTGGGAATCTTAGGTCGTTGCAAAATCTGTTGCTG
TTTCATATGATTCCCGCTCGCATTGTTTCCAACCAATGGCCGGCGCGTGTGCACGCGACC
TTGTATCCTGGAGATGAGAATGTAAATGTTGTGCAGAAGAACGGTGAGAAAATGGTGAGC
AGCGCAATGATTATTAAGCAAGACGATATTATCAAACCCGACGGTGTAATTCACGGGATT
GAGCGTGTGTTGATACCTAAATCAGTTCAACAAGATTTCAACACCCGTAGAAGTCTCCGG
TCAATCTCCGCCGTGCTGCCCGAAGGAGCACCGGAAGTTGACCCGAGGACTCACCGGTTG
AAGAAACCTGCACCCGTCCCAGCTGGCGCACCACCAGTGCTGCCAGTATACGATGCACTA
GCGCCCGGGCCATCTCTGGCCCCGGCACCGGCTCCCGGCCCAGGTGGACCCCACCATCAC
TTTGATGGTGAAAGTCAAGTAAAAGATTTTATTCAAACACTCCTACATTATGGAGGTTAC
AATGAATTAGCAGACATTCTTGTGAATCTAACATCATTGGCTACAGAAATGGGTAAATTA
GTATCAGAAGGGTATGTTTTAACTGTTTTGGCGCCCAATGATGAAGCGATGGCTAAGCTG
ACGACTGATCAGCTTAGCGAACCAGGGGCACCAGAACAGATAATGTATTACCATATAATA
CCGGAGTATCAAACGGAGGAAAGTATGTATAATGCAGTGAGGAGATTTGGGAAAGTGAAG
TATGATACATTGAGGTTACCACATAAAGTTGTGGCTGAGGAAGCTGATGGTTCAGTGAAA
TTTGGGGCAGGTGAAGAAGGGGCATATTTGTTTGATCCTGATATTTATACTGATGGAAGG
ATCTCTGTGCAAGGAGTTGATGGTGTTCTGTTCCCTATTGAGGAAATTAAGGTGGCTCCT
GTAGCTGCCCCTGTTGCTAAGGTTGTTGCAAAGCCAAGAAGAGGAAAGTTGATGGAAGTA
GTATGTGGTACACTGGGGTCATTTGCTTTTGCTAGTTGTCATTAA

Peptide Sequence

PEP ID

XP_016436048.1
PEP Infomation

PREDICTED: fasciclin-like arabinogalactan protein 17 isoform X2 [Nicotiana tabacum]
Sequence

MDFQIYGVSNLFIFTVILLFSIAAATLQENQNATFVKPTTSAPQINSNSILVALLDSHYT
ELSELVEKALLLQTLEEAVSKHNITIFAPKNEALERDLDPEFKRFLLEPGNLRSLQNLLL
FHMIPARIVSNQWPARVHATLYPGDENVNVVQKNGEKMVSSAMIIKQDDIIKPDGVIHGI
ERVLIPKSVQQDFNTRRSLRSISAVLPEGAPEVDPRTHRLKKPAPVPAGAPPVLPVYDAL
APGPSLAPAPAPGPGGPHHHFDGESQVKDFIQTLLHYGGYNELADILVNLTSLATEMGKL
VSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHIIPEYQTEESMYNAVRRFGKVK
YDTLRLPHKVVAEEADGSVKFGAGEEGAYLFDPDIYTDGRISVQGVDGVLFPIEEIKVAP
VAAPVAKVVAKPRRGKLMEVVCGTLGSFAFASCH

Transcript Sequence

Gene sequence data has not been registered.